
 Originally Posted by 
Croakmore
					
				 
				>   John, let me try to answer you this way and explain to you why
>   your statistical model is not a good idea.
>   These are the known causes of evolution:
>   1. Random genetic drift, caused by a critical decrease in
>   population size, which can lead to either the “bottleneck effect”
>   (e.g., excessive hunting of California elephant seals) or the
>   “founder effect” (e.g., Asian migration into Western hemisphere
>   following Ice Ages). Neither are considered “selective” in the
>   neo-Darwinian sense.
>   2. Gene flow, caused by the trans-species migration of genes, as
>   they are well known to “jump” around (e.g., tsetse fly genes are
>   known to have “jumped” into the human gene pool…Kersplash!)
>   3. Random mutations of genes, caused by some kind of reshuffling
>   of the DNA or RNA sequence that somehow finds genetic durability;
>   maybe just a single substitution of a nucleotide in a codon,
>   leading to a slightly different genetic expression (e.g., UV light
>   can force enough energy into a DNA molecule to randomly alter its
>   sequence).
>   4. Disproportionate mating in a population, cause by preferential
>   factors that influence mating options (e.g., some guys are luckier
>   than others), which are nevertheless non-selective in a Darwinian
>   sense.
>   5. Natural selection, caused by disproportionate success in
>   reproduction. This is the only cause that biologists regard as
>   “selective,” because nature makes the rules that all biological
>   systems must measure up to. (When the pioneers went West, they had
>   a proverb: “Root, hog, or die.” Those who could either root or hog
>   were “selected” by virtue of the fact that they were the only ones
>   left to advance their genes.
>   Notice that evolution usually is a combination of these five
>   factors, and so there may be many permutations, and each with a
>   different emphasis here or there.
>   Confusing this even further is that jumping-gene business. It
>   occurs in all forms of life (e.g., it’s going on right now in your
>   intestines, wherein many of your resident E. coli are conjugating
>   like crazy to keep their genes in the game). The most confounding
>   thing that amazes me is this business of “crossing over,”
>   occurring in the gamete production process known as meiosis. In
>   the first prophase some genes actually jump from one paired
>   chromosome to the other; it appears to be random and with no
>   predictive model possible. The end result of crossing over is
>   huge, because the gamete (sperm or egg) is the ONLY part of any
>   individual of any species that moves on in time or otherwise
>   survives. This is called “homology,” and it certainly does make
>   evolution appear to be mostly a genetic gambit. But the field of
>   biology is still mulling over the idea that giraffes got their
>   long necks the old Lamarckian way – by way of something that
>   somehow eludes the rule of homology.
>   All of this is to say, John, that the blithering complication of
>   factors and multi-conditional bifurcations leave nothing but
>   confusion for the biologist who seeks to build a model of
>   biological evolution, especially a statistical one. I know of two
>   biologist who managed to observe evolution in a fruit-fly
>   population (Drosophila) by actually watching the appearance of a
>   new species. They concluded that drift and selection shared almost
>   equally in explaining the cause of this speciation. Furthermore,
>   they concluded after a rigorous study that this speciation had
>   very little influence from genetic mutation per se.
>   From my POV, I can’t see any reasonable way to build a statistical
>   model of evolution that will account for your giraffe’s long neck.
>   Others will disagree with me, especially those who do not prefer
>   the neo-Darwinian approach. They want to sell me a different kind
>   of vacuum cleaner; I’ll listen to their pitch, but I don’t let
>   them in the door.